Will Allah accept my prayers if I'm distracted by bad thoughts due to mental illness?

I am suffering from one mental disorder called obsessive-compulsive disorder (OCD). My main problem is when I start doing salah, I frequently get bad thoughts and bad words in my mind. I never mean those thoughts, but they only come when I start praying. My psychiatrist diagnosed it is one form of OCD, for which I am taking medication. I am praying all the time but these bad thoughts disturb my prayers. Will Allah accept my prayers?